Detection of Hepatitis B virus subgenotype A1 in a Quilombo community from Maranhao, Brazil

Carregando...
Imagem de Miniatura
Citações na Scopus
14
Tipo de produção
article
Data de publicação
2011
Título da Revista
ISSN da Revista
Título do Volume
Editora
BIOMED CENTRAL LTD
Citação
VIROLOGY JOURNAL, v.8, article ID 415, 6p, 2011
Projetos de Pesquisa
Unidades Organizacionais
Fascículo
Resumo
Background: The Brazilian population is mainly descendant from European colonizers, Africans and Native Americans. Some Afro-descendants lived in small isolated communities since the slavery period. The epidemiological status of HBV infection in Quilombos communities from northeast of Brazil remains unknown. The aim of this study was to characterize the HBV genotypes circulating inside a Quilombo isolated community from Maranhao State, Brazil. Methods: Seventy-two samples from Frechal Quilombo community at Maranhao were collected. All serum samples were screened by enzyme-linked immunosorbent assays for the presence of hepatitis B surface antigen ( HBsAg). HBsAg positive samples were submitted to DNA extraction and a fragment of 1306 bp partially comprising HBsAg and polymerase coding regions (S/POL) was amplified by nested PCR and its nucleotide sequence was determined. Viral isolates were genotyped by phylogenetic analysis using reference sequences from each genotype obtained from GenBank (n = 320). Sequences were aligned using Muscle software and edited in the SE-AL software. Bayesian phylogenetic analyses were conducted using Markov Chain Monte Carlo (MCMC) method to obtain the MCC tree using BEAST v.1.5.3. Results: Of the 72 individuals, 9 (12.5%) were HBsAg-positive and 4 of them were successfully sequenced for the 1306 bp fragment. All these samples were genotype A1 and grouped together with other sequences reported from Brazil. Conclusions: The present study represents the first report on the HBV genotypes characterization of this community in the Maranhao state in Brazil where a high HBsAg frequency was found. In this study, we reported a high frequency of HBV infection and the exclusive presence of subgenotype A1 in an Afro-descendent community in the Maranhao State, Brazil.
Palavras-chave
Hepatitis B virus, Genotype A1, Quilombo community, Maranhao state, Brazil, Bayesian Analysis
Referências
  1. ALENCASTRO LF, 2000, SAO PAULO COMPANHIA, P9
  2. Mora MVA, 2011, INFECT GENET EVOL, V11, P103, DOI 10.1016/j.meegid.2010.10.003
  3. Ewing B, 1998, GENOME RES, V8, P175
  4. Ribeiro NRC, 2006, LIVER INT, V26, P636, DOI 10.1111/j.1478-3231.2006.01280.x
  5. Kimbi GC, 2004, J GEN VIROL, V85, P1211, DOI 10.1016/vir.0.19749-0
  6. Viana S, 2005, AM J TROP MED HYG, V73, P808
  7. Magnius LO, 1995, INTERVIROLOGY, V38, P24
  8. Matos MAD, 2009, T ROY SOC TROP MED H, V103, P899, DOI 10.1016/j.trstmh.2009.01.013
  9. Bowyer SM, 1997, J GEN VIROL, V78, P1719
  10. Hannoun C, 2000, J GEN VIROL, V81, P2267
  11. Sitnik R, 2004, J CLIN MICROBIOL, V42, P2455, DOI 10.1128/JCM.42.6.2455-2460.2004
  12. Arauz-Ruiz P, 2002, J GEN VIROL, V83, P2059
  13. Pereira LMMB, 2009, AM J TROP MED HYG, V81, P240
  14. Motta-Castro ARC, 2005, J MED VIROL, V77, P188, DOI 10.1002/jmv.20435
  15. SANGER F, 1977, P NATL ACAD SCI USA, V74, P5463, DOI 10.1073/pnas.74.12.5463
  16. Kramvis A, 2007, HEPATOL RES, V37, pS27, DOI 10.1111/j.1872-034X.2007.00100.x
  17. Stuyver L, 2000, J GEN VIROL, V81, P67
  18. Araujo NM, 2004, ARCH VIROL, V149, P1383, DOI 10.1007/s00705-003-0269-4
  19. Bottecchia M, 2008, BMC MICROBIOL, V8, DOI 10.1186/1471-2180-8-11
  20. CHOMCZYNSKI P, 1987, ANAL BIOCHEM, V162, P156, DOI 10.1006/abio.1987.9999
  21. Drummond AJ, 2007, BMC EVOL BIOL, V7, DOI 10.1186/1471-2148-7-214
  22. Edgar RC, 2004, BMC BIOINFORMATICS, V5, P1, DOI 10.1186/1471-2105-5-113
  23. KWOK S, 1989, NATURE, V339, P237, DOI 10.1038/339237a0
  24. Mello FCA, 2007, BMC MICROBIOL, V7, DOI 10.1186/1471-2180-7-103
  25. Motta-Castro A, 2008, ARCH VIROL, V153, P2197, DOI 10.1007/s00705-008-0237-0
  26. Pena SDJ, 2011, PLOS ONE, V6, DOI 10.1371/journal.pone.0017063
  27. Pourkarim MR, 2011, CLIN MICROBIOL INFEC, V17, P947, DOI 10.1111/j.1469-0691.2010.03374.x
  28. Quintero A, 2002, ARCH VIROL, V147, P1829, DOI 10.1007/s00705-002-0842-2
  29. RIBEIRO Darcy, 1995, POVO BRASILEIRO FORM
  30. Santos AO, 2010, VIROL J, V7, DOI 10.1186/1743-422X-7-315
  31. WHO, 2011, HEP B FACT SHEET 204
  32. Yu H, 2010, PLOS ONE, V5, DOI 10.1371/journal.pone.0009297
  33. 2008, RAPOPORT DELEGATION, P2