Non-coding variation in disorders of sex development
Carregando...
Citações na Scopus
42
Tipo de produção
article
Data de publicação
2017
Título da Revista
ISSN da Revista
Título do Volume
Editora
WILEY-BLACKWELL
Autores
Citação
CLINICAL GENETICS, v.91, n.2, Special Issue, p.163-172, 2017
Resumo
Genetic studies in Disorders of Sex Development (DSD), representing a wide spectrum of developmental or functional conditions of the gonad, have mainly been oriented towards the coding genome. Application of genomic technologies, such as whole-exome sequencing, result in a molecular genetic diagnosis in similar to 50% of cases with DSD. Many of the genes mutated in DSD encode transcription factors such as SRY, SOX9, NR5A1, and FOXL2, characterized by a strictly regulated spatiotemporal expression. Hence, it can be hypothesized that at least part of the missing genetic variation in DSD can be explained by non-coding mutations in regulatory elements that alter gene expression, either by reduced, mis-or overexpression of their target genes. In addition, structural variations such as translocations, deletions, duplications or inversions can affect the normal chromatin conformation by different mechanisms. Here, we review non-coding defects in human DSD phenotypes and in animal models. The wide variety of non-coding defects found in DSD emphasizes that the regulatory landscape of known and to be discovered DSD genes has to be taken into consideration when investigating the molecular pathogenesis of DSD.
Palavras-chave
CNVs, DSD, gene regulation, non-coding variation
Referências
- Assumpcao JG, 2005, J ENDOCRINOL INVEST, V28, P651
- Audi L, 2010, J CLIN ENDOCR METAB, V95, P1876, DOI 10.1210/jc.2009-2146
- Bagheri-Fam S, 2001, GENOMICS, V78, P73, DOI 10.1006/geno.2001.6648
- Bagheri-Fam S, 2006, DEV BIOL, V291, P382, DOI 10.1016/j.ydbio.2005.11.013
- Barbaro M, 2009, EUR J HUM GENET, V17, P1439, DOI 10.1038/ejhg.2009.70
- BARDONI B, 1994, NAT GENET, V7, P497, DOI 10.1038/ng0894-497
- Bashamboo A, 2010, SEX DEV, V4, P213, DOI 10.1159/000314917
- Benko S, 2011, J MED GENET, V48, P825, DOI 10.1136/jmedgenet-2011-100255
- Benko S, 2009, NAT GENET, V41, P359, DOI 10.1038/ng.329
- Beysen D, 2005, AM J HUM GENET, V77, P205, DOI 10.1086/432083
- Bhagavath B, 2014, MOL CELL ENDOCRINOL, V393, P1, DOI 10.1016/j.mce.2014.05.006
- Biason-Lauber A, 2010, BEST PRACT RES CL EN, V24, P163, DOI 10.1016/j.beem.2009.12.002
- Bishop CE, 2000, NAT GENET, V26, P490, DOI 10.1038/82652
- Boulanger L, 2014, CURR BIOL, V24, P404, DOI 10.1016/j.cub.2013.12.039
- Calvari V, 2000, GENOMICS, V65, P203, DOI 10.1006/geno.2000.6160
- Cox JJ, 2011, NEW ENGL J MED, V364, P91, DOI 10.1056/NEJMc1010311
- D'haene B, 2009, PLOS GENET, V5, DOI 10.1371/journal.pgen.1000522
- De Baere E, 2003, AM J HUM GENET, V72, P478, DOI 10.1086/346118
- De Baere E, 2002, J MED GENET, V39, DOI 10.1136/jmg.39.8.e43
- De Baere E, 2001, HUM MOL GENET, V10, P1591, DOI 10.1093/hmg/10.15.1591
- De Baere E, 2009, FOLIA HISTOCHEM CYTO, V47, pS43, DOI 10.2478/v10042-009-0062-7
- Dixon JR, 2012, NATURE, V485, P376, DOI 10.1038/nature11082
- FOSTER JW, 1994, NATURE, V372, P525, DOI 10.1038/372525a0
- Franke M, 2016, NATURE, P1
- Haines B, 2015, J CLIN ENDOCR METAB, V100, pE815, DOI 10.1210/jc.2014-4383
- Hill-Harfe KL, 2005, AM J HUM GENET, V76, P663, DOI 10.1086/429254
- Hornig NC, 2016, PLOS ONE, V11, DOI 10.1371/journal.pone.0154158
- Hughes IA, 2007, ENDOCRIN DEV, V11, P47
- Hyon C, 2015, AM J MED GENET A, V167, P1851, DOI 10.1002/ajmg.a.37101
- Jakobsen LP, 2007, J MED GENET, V44, P381, DOI 10.1136/jmg.2006.046177
- Jakubiczka S, 2010, SEX DEV, V4, P143, DOI 10.1159/000302403
- Kansakoski J, 2016, SCI REP-UK, V6, DOI 10.1038/srep32819
- Kim GJ, 2015, J MED GENET, V52, P240, DOI 10.1136/jmedgenet-2014-102864
- Kleinjan DA, 2005, AM J HUM GENET, V76, P8, DOI 10.1086/426833
- Kurth I, 2009, NAT GENET, V41, P862, DOI 10.1038/ng0809-862
- Kwok C, 1996, J MED GENET, V33, P465, DOI 10.1136/jmg.33.6.465
- Lecointre C, 2009, AM J MED GENET A, V149A, P1183, DOI 10.1002/ajmg.a.32830
- Leipoldt M, 2007, CLIN GENET, V71, P67, DOI 10.1111/j.1399-0004.2007.00736.x
- Lerer I, 2005, HUM MOL GENET, V14, P3911, DOI 10.1093/hmg/ddi415
- Lupianez DG, 2015, CELL, V161, P1012, DOI 10.1016/j.cell.2015.04.004
- Lybaek H, 2014, EPIGENETICS-US, V9, P416, DOI 10.4161/epi.27474
- MANSOUR S, 1995, J MED GENET, V32, P415, DOI 10.1136/jmg.32.6.415
- MARAIA R, 1991, CLIN GENET, V39, P401
- Marcinkowska-Swojak M, 2015, SCI REP-UK, V5, DOI 10.1038/srep14696
- Margarit E, 1998, BIOCHEM BIOPH RES CO, V245, P370, DOI [10.1006/bbrc.1998.8441, DOI 10.1006/BBRC.1998.8441]
- McElreavey K, 1996, P NATL ACAD SCI USA, V93, P8590, DOI 10.1073/pnas.93.16.8590
- MCELREAVY K, 1992, P NATL ACAD SCI USA, V89, P11016, DOI 10.1073/pnas.89.22.11016
- MIZOKAMI A, 1994, J BIOL CHEM, V269, P25655
- MUSCATELLI F, 1994, NATURE, V372, P672, DOI 10.1038/372672a0
- Ninomiya S, 1996, HUM MOL GENET, V5, P69, DOI 10.1093/hmg/5.1.69
- Ohnesorg T, 2016, SEX DEV, V10, P59, DOI 10.1159/000445398
- Onesimo R, 2012, AM J MED GENET A, V158A, P2266, DOI 10.1002/ajmg.a.35489
- Pailhoux E, 2001, NAT GENET, V29, P453, DOI 10.1038/ng769
- Pfeifer D, 1999, AM J HUM GENET, V65, P111, DOI 10.1086/302455
- Pop R, 2004, J MED GENET, V41, DOI 10.1136/jmg.2003.013185
- Poulat F, 1998, HUM MUTAT, pS192
- Qin YJ, 2004, HUM MOL GENET, V13, P1213, DOI 10.1093/hmg/ddh141
- Qin YJ, 2003, HUM MOL GENET, V12, P509, DOI 10.1093/hmg/ddg045
- Raymond CS, 1999, DEV BIOL, V215, P208, DOI 10.1006/dbio.1999.9461
- Raymond CS, 1999, HUM MOL GENET, V8, P989, DOI 10.1093/hmg/8.6.989
- Refai O, 2010, AM J MED GENET A, V152A, P422, DOI 10.1002/ajmg.a.33201
- Ross DGF, 2008, BMC MOL BIOL, V9, DOI 10.1186/1471-2199-9-85
- Rossi E, 2015, SEX DEV, V9, P155, DOI 10.1159/000435871
- Rossi E, 2014, PLOS ONE, V9, DOI 10.1371/journal.pone.0101244
- Savarirayan R, 1998, J MED GENET, V35, P597, DOI 10.1136/jmg.35.7.597
- Shi FB, 2014, HUM MOL GENET, V23, P3792, DOI 10.1093/hmg/ddu092
- Skinningsrud B, 2009, J CLIN ENDOCR METAB, V94, P4086, DOI 10.1210/jc.2009-0923
- Smyk M, 2007, HUM GENET, V122, P63, DOI 10.1007/s00439-007-0373-8
- Smyk M, 2013, CHROMOSOME RES, V21, P781, DOI 10.1007/s10577-013-9386-4
- SPIELMANN M, 2016, HUM MOL GENET, V25
- Sutton E, 2011, J CLIN INVEST, V121, P328, DOI 10.1172/JCI42580
- TOMMERUP N, 1993, NAT GENET, V4, P170, DOI 10.1038/ng0693-170
- Veitia RA, 1997, GENE, V199, P63, DOI 10.1016/S0378-1119(97)00347-8
- Velagaleti GVN, 2005, AM J HUM GENET, V76, P652, DOI 10.1086/429252
- Verdin H, 2013, PLOS GENET, V9, DOI 10.1371/journal.pgen.1003358
- Vetro A, 2014, EUR J HUM GENET, V23, P1
- Vetro A, 2011, J MED GENET, V48, P710, DOI 10.1136/jmedgenet-2011-100036
- Wagner T, 1997, CYTOGENET CELL GENET, V76, P172, DOI 10.1159/000134538
- WAGNER T, 1994, CELL, V79, P1111, DOI 10.1016/0092-8674(94)90041-8
- White S, 2011, PLOS ONE, V6, DOI 10.1371/journal.pone.0017793
- Wirth J, 1996, HUM GENET, V97, P186, DOI 10.1007/BF02265263
- Wunderle VM, 1998, P NATL ACAD SCI USA, V95, P10649, DOI 10.1073/pnas.95.18.10649
- Xiao B, 2013, EUR J MED GENET, V56, P695, DOI 10.1016/j.ejmg.2013.10.001
- YOUNG ID, 1992, J MED GENET, V29, P251, DOI 10.1136/jmg.29.4.251
- Zhang F, 2015, HUM MOL GENET, V24, pR102, DOI 10.1093/hmg/ddv259