BCL11B mutations in patients affected by a neurodevelopmental disorder with reduced type 2 innate lymphoid cells
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Citações na Scopus
71
Tipo de produção
article
Data de publicação
2018
Título da Revista
ISSN da Revista
Título do Volume
Editora
OXFORD UNIV PRESS
Autores
LESSEL, Davor
GEHBAUER, Christina
BRAMSWIG, Nuria C.
SCHLUTH-BOLARD, Caroline
VENKATARAMANAPPA, Sathish
GASSEN, Koen L. I. van
HEMPEL, Maja
HAACK, Tobias B.
BARESIC, Anja
GENETTI, Casie A.
Citação
BRAIN, v.141, p.2299-2311, 2018
Resumo
The transcription factor BCL11B is essential for development of the nervous and the immune system, and Bcl11b deficiency results in structural brain defects, reduced learning capacity, and impaired immune cell development in mice. However, the precise role of BCL11B in humans is largely unexplored, except for a single patient with a BCL11B missense mutation, affected by multisystem anomalies and profound immune deficiency. Using massively parallel sequencing we identified 13 patients bearing heterozygous germline alterations in BCL11B. Notably, all of them are affected by global developmental delay with speech impairment and intellectual disability; however, none displayed overt clinical signs of immune deficiency. Six frameshift mutations, two nonsense mutations, one missense mutation, and two chromosomal rearrangements resulting in diminished BCL11B expression, arose de novo. A further frameshift mutation was transmitted from a similarly affected mother. Interestingly, the most severely affected patient harbours a missense mutation within a zinc-finger domain of BCL11B, probably affecting the DNA-binding structural interface, similar to the recently published patient. Furthermore, the most C-terminally located premature termination codon mutation fails to rescue the progenitor cell proliferation defect in hippocampal slice cultures from Bcl11b-deficient mice. Concerning the role of BCL11B in the immune system, extensive immune phenotyping of our patients revealed alterations in the T cell compartment and lack of peripheral type 2 innate lymphoid cells (ILC2s), consistent with the findings described in Bcl11b-deficient mice. Unsupervised analysis of 102 T lymphocyte subpopulations showed that the patients clearly cluster apart from healthy children, further supporting the common aetiology of the disorder. Taken together, we show here that mutations leading either to BCL11B haploinsufficiency or to a truncated BCL11B protein clinically cause a non-syndromic neurodevelopmental delay. In addition, we suggest that missense mutations affecting specific sites within zinc-finger domains might result in distinct and more severe clinical outcomes.
Palavras-chave
BCL11B, developmental delay, intellectual disability, type 2 innate lymphoid cells, neurodevelopment
Referências
- Arlotta P, 2005, NEURON, V45, P207, DOI 10.1016/j.neuron.2004.12.036
- Arlotta P, 2008, J NEUROSCI, V28, P622, DOI 10.1523/JNEUROSCI.2986-07.2008
- Basak A, 2015, J CLIN INVEST, V125, P2363, DOI 10.1172/JCI81163
- Califano D, 2015, IMMUNITY, V43, P354, DOI 10.1016/j.immuni.2015.07.005
- Califano D, 2014, J CLIN INVEST, V124, P174, DOI 10.1172/JCI70103
- Cardoso V, 2017, NATURE, V549, P277, DOI 10.1038/nature23469
- Chen K, 2009, NAT METHODS, V6, P677, DOI [10.1038/NMETH.1363, 10.1038/nmeth.1363]
- Dazzo E, 2015, AM J HUM GENET, V96, P992, DOI 10.1016/j.ajhg.2015.04.020
- de Bruin C, 2016, HORM RES PAEDIAT, V86, P342, DOI 10.1159/000446476
- Dias C, 2016, AM J HUM GENET, V99, P253, DOI 10.1016/j.ajhg.2016.05.030
- Gauthier J, 2018, ANN NEUROL, V83, P1089, DOI 10.1002/ana.25204
- Golonzhka O, 2009, J INVEST DERMATOL, V129, P1459, DOI 10.1038/jid.2008.392
- Golonzhka O, 2009, P NATL ACAD SCI USA, V106, P4278, DOI 10.1073/pnas.0900568106
- Hamby Stephen E., 2011, Human Genomics, V5, P241
- Harmston N, 2017, NAT COMMUN, V8, DOI 10.1038/s41467-017-00524-5
- Hempel M, 2015, AM J HUM GENET, V97, P493, DOI 10.1016/j.ajhg.2015.08.003
- Ippolito GC, 2014, P NATL ACAD SCI USA, V111, pE998, DOI 10.1073/pnas.1319228111
- Klose CSN, 2017, NATURE, V549, P282, DOI 10.1038/nature23676
- Kominami R, 2012, P JPN ACAD B-PHYS, V88, P72, DOI 10.2183/pjab.88.72
- Kubo M, 2017, IMMUNOL REV, V278, P162, DOI 10.1111/imr.12557
- Lek M, 2016, NATURE, V536, P285, DOI 10.1038/nature19057
- Lennon MJ, 2017, FRONT CELL NEUROSCI, V11, DOI 10.3389/fncel.2017.00089
- Lessel D, 2017, AM J HUM GENET, V101, P716, DOI 10.1016/j.ajhg.2017.09.014
- Li H, 2009, BIOINFORMATICS, V25, P1754, DOI 10.1093/bioinformatics/btp324
- Li L, 2013, BLOOD, V122, P902, DOI 10.1182/blood-2012-08-447839
- Li P, 2010, SCIENCE, V329, P85, DOI 10.1126/science.1188063
- Liu PT, 2003, NAT IMMUNOL, V4, P525, DOI 10.1038/ni925
- Livak KJ, 2001, METHODS, V25, P402, DOI 10.1006/meth.2001.1262
- Louie RJ, 2017, AM J MED GENET A, V173, P1219, DOI 10.1002/ajmg.a.38144
- Monticelli LA, 2011, NAT IMMUNOL, V12, P1045, DOI [10.1038/ni.2131, 10.1031/ni.2131]
- Najafabadi HS, 2015, NAT BIOTECHNOL, V33, P555, DOI 10.1038/nbt.3128
- Petrovski S, 2013, PLOS GENET, V9, DOI 10.1371/journal.pgen.1003709
- Punwani D, 2016, NEW ENGL J MED, V375, P2165, DOI 10.1056/NEJMoa1509164
- Samocha KE, 2014, NAT GENET, V46, P944, DOI 10.1038/ng.3050
- Simon R, 2016, GENES BRAIN BEHAV, V15, P405, DOI 10.1111/gbb.12287
- Simon R, 2012, EMBO J, V31, P2922, DOI 10.1038/emboj.2012.142
- Sobreira Nara, 2015, Hum Mutat, V36, P928, DOI 10.1002/humu.22844
- Tanaka AJ, 2015, AM J HUM GENET, V97, P457, DOI 10.1016/j.ajhg.2015.07.014
- Thorvaldsdottir H, 2013, BRIEF BIOINFORM, V14, P178, DOI 10.1093/bib/bbs017
- van Rijt L, 2016, SEMIN IMMUNOPATHOL, V38, P483, DOI 10.1007/s00281-016-0556-2
- Venkataramanappa S, 2015, JOVE-J VIS EXP, DOI [10.3791/52550, DOI 10.3791/52550.]
- Wakabayashi Y, 2003, NAT IMMUNOL, V4, P533, DOI 10.1038/ni927
- Walker JA, 2015, J EXP MED, V212, P875, DOI 10.1084/jem.20142224
- Wallrapp A, 2017, NATURE, V549, P351, DOI 10.1038/nature24029
- Wang ZX, 2012, PLOS ONE, V7, DOI 10.1371/journal.pone.0051262
- Wolfe SA, 2000, ANNU REV BIOPH BIOM, V29, P183, DOI 10.1146/annurev.biophys.29.1.183
- Yu Y, 2016, NATURE, V539, P102, DOI 10.1038/nature20105
- Yu Y, 2015, J EXP MED, V212, P865, DOI 10.1084/jem.20142318